WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25A11.4e.1 Sequence Name  C25A11.4e.1
Length (nt)  3534   Chromosome Location  X: 9105515-9113324
Chromosome . Primary Identifier  X Chromosome Location . Start  9105515
Chromosome Location . End  9113324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25A11.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25A11.4e C25A11.4e 3534   X: 9105515-9106296

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4e.1 9105515 9113324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243576   782   X: 9105515-9106296 Caenorhabditis elegans
Exon243584   183   X: 9106364-9106546 Caenorhabditis elegans
Exon243600   651   X: 9106596-9107246 Caenorhabditis elegans
Exon243615   71   X: 9107304-9107374 Caenorhabditis elegans
Exon243631   173   X: 9109088-9109260 Caenorhabditis elegans
Exon243645   123   X: 9109674-9109796 Caenorhabditis elegans
Exon243660   119   X: 9109918-9110036 Caenorhabditis elegans
Exon243674   421   X: 9110262-9110682 Caenorhabditis elegans
Exon243689   160   X: 9111734-9111893 Caenorhabditis elegans
Exon243703   106   X: 9112058-9112163 Caenorhabditis elegans
Exon243717   120   X: 9112212-9112331 Caenorhabditis elegans
Exon243731   120   X: 9112374-9112493 Caenorhabditis elegans
Exon243745   193   X: 9112544-9112736 Caenorhabditis elegans
Exon243759   137   X: 9112963-9113099 Caenorhabditis elegans
Exon243768   175   X: 9113150-9113324 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25A11.4e.1 9105515 9113324 1

1 Sequence

Length
3534

1 Sequence Ontology Term

Identifier Name Description
transcript