WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18G5.3.2 Sequence Name  F18G5.3.2
Length (nt)  1330   Chromosome Location  X: 9243557-9249107
Chromosome . Primary Identifier  X Chromosome Location . Start  9243557
Chromosome Location . End  9249107 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18G5.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001674 gpa-12 F18G5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18G5.3 F18G5.3 1068   X: 9247017-9247103

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18G5.3.2 9243557 9249107 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244023   62   X: 9243557-9243618 Caenorhabditis elegans
Exon244024   97   X: 9247007-9247103 Caenorhabditis elegans
Exon244027   129   X: 9247150-9247278 Caenorhabditis elegans
Exon244029   101   X: 9247328-9247428 Caenorhabditis elegans
Exon244031   130   X: 9247699-9247828 Caenorhabditis elegans
Exon244033   146   X: 9247872-9248017 Caenorhabditis elegans
Exon244035   106   X: 9248074-9248179 Caenorhabditis elegans
Exon244037   192   X: 9248229-9248420 Caenorhabditis elegans
Exon244039   367   X: 9248741-9249107 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18G5.3.2 9243557 9249107 1

1 Sequence

Length
1330

1 Sequence Ontology Term

Identifier Name Description
transcript