WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1e.1 Sequence Name  C23F12.1e.1
Length (nt)  10241   Chromosome Location  X: 9397752-9427243
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9427243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1e C23F12.1e 9681   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1e.1 9397752 9427243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244383   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244386   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244395   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244404   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244413   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244422   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244431   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244440   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244451   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244460   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244470   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244480   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244492   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244505   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244518   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244532   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244547   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244562   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244575   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244595   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244616   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244638   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244662   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244688   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244712   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244738   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244764   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244792   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244836   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244865   255   X: 9418609-9418863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1e.1 9397752 9427243 1

1 Sequence

Length
10241

1 Sequence Ontology Term

Identifier Name Description
transcript