WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1d.1 Sequence Name  C23F12.1d.1
Length (nt)  7739   Chromosome Location  X: 9409814-9427246
Chromosome . Primary Identifier  X Chromosome Location . Start  9409814
Chromosome Location . End  9427246 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1d C23F12.1d 7176   X: 9409814-9409943

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1d.1 9409814 9427246 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244590   130   X: 9409814-9409943 Caenorhabditis elegans
Exon244594   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244615   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244637   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244661   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244687   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244711   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244737   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244763   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244791   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244835   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244864   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244893   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244922   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244951   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244980   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245009   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245038   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245067   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245096   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245173   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245202   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245231   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245260   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245289   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245318   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245347   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245397   848   X: 9426399-9427246 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1d.1 9409814 9427246 1

1 Sequence

Length
7739

1 Sequence Ontology Term

Identifier Name Description
transcript