WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1g.5 Sequence Name  C23F12.1g.5
Length (nt)  7711   Chromosome Location  X: 9412245-9427253
Chromosome . Primary Identifier  X Chromosome Location . Start  9412245
Chromosome Location . End  9427253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1g.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1g C23F12.1g 5670   X: 9417087-9418554

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.5 9412245 9427253 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244591   121   X: 9412245-9412365 Caenorhabditis elegans
Exon244621   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244643   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244667   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244693   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244717   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244743   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244769   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244797   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244822   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244841   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244871   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244900   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244929   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244958   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244987   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245016   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245045   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245074   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245103   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245180   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245209   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245238   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245267   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245296   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245325   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245354   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245401   855   X: 9426399-9427253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.5 9412245 9427253 1

1 Sequence

Length
7711

1 Sequence Ontology Term

Identifier Name Description
transcript