WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC506.4c.1 Sequence Name  ZC506.4c.1
Length (nt)  2859   Chromosome Location  X: 9968629-9976306
Chromosome . Primary Identifier  X Chromosome Location . Start  9968629
Chromosome Location . End  9976306 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC506.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003232 mgl-1 ZC506.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC506.4c ZC506.4c 2859   X: 9968629-9968788

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4c.1 9968629 9976306 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247644   160   X: 9968629-9968788 Caenorhabditis elegans
Exon247647   146   X: 9969191-9969336 Caenorhabditis elegans
Exon247651   248   X: 9969386-9969633 Caenorhabditis elegans
Exon247655   73   X: 9969676-9969748 Caenorhabditis elegans
Exon247659   259   X: 9969791-9970049 Caenorhabditis elegans
Exon247663   239   X: 9970339-9970577 Caenorhabditis elegans
Exon247667   102   X: 9970619-9970720 Caenorhabditis elegans
Exon247672   164   X: 9970778-9970941 Caenorhabditis elegans
Exon247676   148   X: 9970990-9971137 Caenorhabditis elegans
Exon247680   97   X: 9971183-9971279 Caenorhabditis elegans
Exon247685   372   X: 9971651-9972022 Caenorhabditis elegans
Exon247689   115   X: 9972101-9972215 Caenorhabditis elegans
Exon247693   110   X: 9972331-9972440 Caenorhabditis elegans
Exon247697   189   X: 9972486-9972674 Caenorhabditis elegans
Exon247701   110   X: 9972797-9972906 Caenorhabditis elegans
Exon247706   82   X: 9972951-9973032 Caenorhabditis elegans
Exon247709   107   X: 9973090-9973196 Caenorhabditis elegans
Exon247712   36   X: 9973799-9973834 Caenorhabditis elegans
Exon247715   84   X: 9973922-9974005 Caenorhabditis elegans
Exon247719   18   X: 9976289-9976306 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC506.4c.1 9968629 9976306 -1

1 Sequence

Length
2859

1 Sequence Ontology Term

Identifier Name Description
transcript