WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W07E11.1a.1 Sequence Name  W07E11.1a.1
Length (nt)  7329   Chromosome Location  X: 10084622-10104650
Chromosome . Primary Identifier  X Chromosome Location . Start  10084622
Chromosome Location . End  10104650 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W07E11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012326 W07E11.1 W07E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W07E11.1a W07E11.1a 6528   X: 10084667-10084926

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W07E11.1a.1 10084622 10104650 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247934   305   X: 10084622-10084926 Caenorhabditis elegans
Exon247935   622   X: 10085180-10085801 Caenorhabditis elegans
Exon247938   187   X: 10086123-10086309 Caenorhabditis elegans
Exon247941   155   X: 10086915-10087069 Caenorhabditis elegans
Exon247955   156   X: 10095534-10095689 Caenorhabditis elegans
Exon247957   273   X: 10095748-10096020 Caenorhabditis elegans
Exon247959   153   X: 10096367-10096519 Caenorhabditis elegans
Exon247961   79   X: 10096703-10096781 Caenorhabditis elegans
Exon247963   422   X: 10097391-10097812 Caenorhabditis elegans
Exon247965   163   X: 10097931-10098093 Caenorhabditis elegans
Exon247969   95   X: 10099066-10099160 Caenorhabditis elegans
Exon247971   558   X: 10099213-10099770 Caenorhabditis elegans
Exon247973   1262   X: 10099900-10101161 Caenorhabditis elegans
Exon247975   388   X: 10101207-10101594 Caenorhabditis elegans
Exon247977   156   X: 10101843-10101998 Caenorhabditis elegans
Exon247979   632   X: 10102202-10102833 Caenorhabditis elegans
Exon247981   799   X: 10102881-10103679 Caenorhabditis elegans
Exon247984   924   X: 10103727-10104650 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W07E11.1a.1 10084622 10104650 1

1 Sequence

Length
7329

1 Sequence Ontology Term

Identifier Name Description
transcript