WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06H11.1c.1 Sequence Name  T06H11.1c.1
Length (nt)  2165   Chromosome Location  X: 10104611-10117575
Chromosome . Primary Identifier  X Chromosome Location . Start  10104611
Chromosome Location . End  10117575 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06H11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006792 unc-58 T06H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06H11.1c T06H11.1c 1587   X: 10105099-10105205

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1c.1 10104611 10117575 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247986   595   X: 10104611-10105205 Caenorhabditis elegans
Exon247994   185   X: 10105343-10105527 Caenorhabditis elegans
Exon248001   91   X: 10105572-10105662 Caenorhabditis elegans
Exon248008   122   X: 10106065-10106186 Caenorhabditis elegans
Exon248015   67   X: 10106232-10106298 Caenorhabditis elegans
Exon248020   39   X: 10106683-10106721 Caenorhabditis elegans
Exon248026   121   X: 10106828-10106948 Caenorhabditis elegans
Exon248033   170   X: 10106996-10107165 Caenorhabditis elegans
Exon248040   257   X: 10107214-10107470 Caenorhabditis elegans
Exon248047   131   X: 10107663-10107793 Caenorhabditis elegans
Exon248056   149   X: 10109183-10109331 Caenorhabditis elegans
Exon248067   238   X: 10117338-10117575 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1c.1 10104611 10117575 -1

1 Sequence

Length
2165

1 Sequence Ontology Term

Identifier Name Description
transcript