WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:T06H11.1e.1 Sequence Name  T06H11.1e.1
Length (nt)  2075   Chromosome Location  X: 10104612-10111220
Chromosome . Primary Identifier  X Chromosome Location . Start  10104612
Chromosome Location . End  10111220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06H11.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006792 unc-58 T06H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06H11.1e T06H11.1e 1506   X: 10105099-10105205

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1e.1 10104612 10111220 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247987   594   X: 10104612-10105205 Caenorhabditis elegans
Exon247996   185   X: 10105343-10105527 Caenorhabditis elegans
Exon248003   91   X: 10105572-10105662 Caenorhabditis elegans
Exon248010   122   X: 10106065-10106186 Caenorhabditis elegans
Exon248017   67   X: 10106232-10106298 Caenorhabditis elegans
Exon248022   39   X: 10106683-10106721 Caenorhabditis elegans
Exon248028   121   X: 10106828-10106948 Caenorhabditis elegans
Exon248035   170   X: 10106996-10107165 Caenorhabditis elegans
Exon248042   257   X: 10107214-10107470 Caenorhabditis elegans
Exon248049   131   X: 10107663-10107793 Caenorhabditis elegans
Exon248058   149   X: 10109183-10109331 Caenorhabditis elegans
Exon248062   149   X: 10111072-10111220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1e.1 10104612 10111220 -1

1 Sequence

Length
2075

1 Sequence Ontology Term

Identifier Name Description
transcript