WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06H11.1d.1 Sequence Name  T06H11.1d.1
Length (nt)  1731   Chromosome Location  X: 10105099-10122997
Chromosome . Primary Identifier  X Chromosome Location . Start  10105099
Chromosome Location . End  10122997 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06H11.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006792 unc-58 T06H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06H11.1d T06H11.1d 1731   X: 10105099-10105205

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1d.1 10105099 10122997 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247989   107   X: 10105099-10105205 Caenorhabditis elegans
Exon247995   185   X: 10105343-10105527 Caenorhabditis elegans
Exon248002   91   X: 10105572-10105662 Caenorhabditis elegans
Exon248009   122   X: 10106065-10106186 Caenorhabditis elegans
Exon248016   67   X: 10106232-10106298 Caenorhabditis elegans
Exon248021   39   X: 10106683-10106721 Caenorhabditis elegans
Exon248027   121   X: 10106828-10106948 Caenorhabditis elegans
Exon248034   170   X: 10106996-10107165 Caenorhabditis elegans
Exon248041   257   X: 10107214-10107470 Caenorhabditis elegans
Exon248048   131   X: 10107663-10107793 Caenorhabditis elegans
Exon248057   149   X: 10109183-10109331 Caenorhabditis elegans
Exon248069   292   X: 10122706-10122997 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1d.1 10105099 10122997 -1

1 Sequence

Length
1731

1 Sequence Ontology Term

Identifier Name Description
transcript