WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06H11.1f.1 Sequence Name  T06H11.1f.1
Length (nt)  1851   Chromosome Location  X: 10105099-10133182
Chromosome . Primary Identifier  X Chromosome Location . Start  10105099
Chromosome Location . End  10133182 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06H11.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006792 unc-58 T06H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06H11.1f T06H11.1f 1851   X: 10105099-10105205

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1f.1 10105099 10133182 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247991   107   X: 10105099-10105205 Caenorhabditis elegans
Exon247997   185   X: 10105343-10105527 Caenorhabditis elegans
Exon248004   91   X: 10105572-10105662 Caenorhabditis elegans
Exon248011   122   X: 10106065-10106186 Caenorhabditis elegans
Exon248018   67   X: 10106232-10106298 Caenorhabditis elegans
Exon248023   39   X: 10106683-10106721 Caenorhabditis elegans
Exon248029   121   X: 10106828-10106948 Caenorhabditis elegans
Exon248036   170   X: 10106996-10107165 Caenorhabditis elegans
Exon248043   257   X: 10107214-10107470 Caenorhabditis elegans
Exon248050   131   X: 10107663-10107793 Caenorhabditis elegans
Exon248059   149   X: 10109183-10109331 Caenorhabditis elegans
Exon248078   112   X: 10128929-10129040 Caenorhabditis elegans
Exon248079   84   X: 10129918-10130001 Caenorhabditis elegans
Exon248081   201   X: 10132105-10132305 Caenorhabditis elegans
Exon248087   15   X: 10133168-10133182 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06H11.1f.1 10105099 10133182 -1

1 Sequence

Length
1851

1 Sequence Ontology Term

Identifier Name Description
transcript