WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09B9.3.1 Sequence Name  F09B9.3.1
Length (nt)  1079   Chromosome Location  X: 10156858-10158829
Chromosome . Primary Identifier  X Chromosome Location . Start  10156858
Chromosome Location . End  10158829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09B9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001331 erd-2.1 F09B9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09B9.3 F09B9.3 642   X: 10157207-10157244

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F09B9.3.1 10156858 10158829 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248140   387   X: 10156858-10157244 Caenorhabditis elegans
Exon248141   98   X: 10157476-10157573 Caenorhabditis elegans
Exon248142   155   X: 10158081-10158235 Caenorhabditis elegans
Exon248143   159   X: 10158288-10158446 Caenorhabditis elegans
Exon248144   101   X: 10158498-10158598 Caenorhabditis elegans
Exon248145   179   X: 10158651-10158829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F09B9.3.1 10156858 10158829 -1

1 Sequence

Length
1079

1 Sequence Ontology Term

Identifier Name Description
transcript