WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC504.2.1 Sequence Name  ZC504.2.1
Length (nt)  1810   Chromosome Location  X: 10412725-10416661
Chromosome . Primary Identifier  X Chromosome Location . Start  10412725
Chromosome Location . End  10416661 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC504.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000047 acr-8 ZC504.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC504.2 ZC504.2 1623   X: 10412842-10412878

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC504.2.1 10412725 10416661 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248856   154   X: 10412725-10412878 Caenorhabditis elegans
Exon248858   155   X: 10412929-10413083 Caenorhabditis elegans
Exon248860   155   X: 10413795-10413949 Caenorhabditis elegans
Exon248862   64   X: 10414227-10414290 Caenorhabditis elegans
Exon248864   138   X: 10414583-10414720 Caenorhabditis elegans
Exon248866   89   X: 10414788-10414876 Caenorhabditis elegans
Exon248868   164   X: 10414926-10415089 Caenorhabditis elegans
Exon248870   144   X: 10415289-10415432 Caenorhabditis elegans
Exon248872   79   X: 10415479-10415557 Caenorhabditis elegans
Exon248874   125   X: 10415603-10415727 Caenorhabditis elegans
Exon248876   326   X: 10415787-10416112 Caenorhabditis elegans
Exon248878   217   X: 10416445-10416661 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC504.2.1 10412725 10416661 1

1 Sequence

Length
1810

1 Sequence Ontology Term

Identifier Name Description
transcript