WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F57C7.3b Sequence Name  F57C7.3b
Length (nt)  864   Chromosome Location  X: 10590355-10590530
Chromosome . Primary Identifier  X Chromosome Location . Start  10590355
Chromosome Location . End  10590530
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C7.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32681 SDN-1, isoform b 30.8 287 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00048861
WBRNAi00109625
WBRNAi00033032
WBRNAi00109237
WBRNAi00065732
WBRNAi00109334
WBRNAi00102205
WBRNAi00109528
WBRNAi00109431

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F57C7.3b 10590355 10590530 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004749 sdn-1 F57C7.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F57C7.3b 10590355 10590530 -1
CDS:F57C7.3b 10591992 10592110 -1
CDS:F57C7.3b 10592257 10592468 -1
CDS:F57C7.3b 10592523 10592623 -1
CDS:F57C7.3b 10592757 10592859 -1
CDS:F57C7.3b 10593126 10593278 -1

1 Sequence

Length
864

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F57C7.3b.1 F57C7.3b.1 1490   X: 10589785-10593334