WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13E6.5.1 Sequence Name  F13E6.5.1
Length (nt)  1105   Chromosome Location  X: 10695312-10697894
Chromosome . Primary Identifier  X Chromosome Location . Start  10695312
Chromosome Location . End  10697894 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13E6.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008749 plpp-1.3 F13E6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13E6.5 F13E6.5 915   X: 10695319-10695417

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13E6.5.1 10695312 10697894 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249886   106   X: 10695312-10695417 Caenorhabditis elegans
Exon249887   74   X: 10695464-10695537 Caenorhabditis elegans
Exon249888   88   X: 10695587-10695674 Caenorhabditis elegans
Exon249889   78   X: 10696112-10696189 Caenorhabditis elegans
Exon249890   107   X: 10696237-10696343 Caenorhabditis elegans
Exon249891   89   X: 10696388-10696476 Caenorhabditis elegans
Exon249892   124   X: 10696969-10697092 Caenorhabditis elegans
Exon249893   134   X: 10697138-10697271 Caenorhabditis elegans
Exon249894   305   X: 10697590-10697894 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13E6.5.1 10695312 10697894 1

1 Sequence

Length
1105

1 Sequence Ontology Term

Identifier Name Description
transcript