WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07A4.1.1 Sequence Name  R07A4.1.1
Length (nt)  1846   Chromosome Location  X: 10734326-10744355
Chromosome . Primary Identifier  X Chromosome Location . Start  10734326
Chromosome Location . End  10744355 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07A4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001202 egl-36 R07A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07A4.1 R07A4.1 1677   X: 10734326-10734419

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07A4.1.1 10734326 10744355 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249946   94   X: 10734326-10734419 Caenorhabditis elegans
Exon249947   100   X: 10741452-10741551 Caenorhabditis elegans
Exon249948   79   X: 10741660-10741738 Caenorhabditis elegans
Exon249949   140   X: 10741788-10741927 Caenorhabditis elegans
Exon249950   118   X: 10741976-10742093 Caenorhabditis elegans
Exon249951   194   X: 10742301-10742494 Caenorhabditis elegans
Exon249952   592   X: 10742542-10743133 Caenorhabditis elegans
Exon249953   93   X: 10743242-10743334 Caenorhabditis elegans
Exon249954   109   X: 10743383-10743491 Caenorhabditis elegans
Exon249955   63   X: 10743540-10743602 Caenorhabditis elegans
Exon249956   264   X: 10744092-10744355 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07A4.1.1 10734326 10744355 1

1 Sequence

Length
1846

1 Sequence Ontology Term

Identifier Name Description
transcript