WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05A10.5c Sequence Name  T05A10.5c
Length (nt)  1134   Chromosome Location  X: 10789682-10789799
Chromosome . Primary Identifier  X Chromosome Location . Start  10789682
Chromosome Location . End  10789799
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A10.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50441 VAP-2, isoform c 43.3 377 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00052434
WBRNAi00052435
WBRNAi00018172
WBRNAi00018173
WBRNAi00071841
WBRNAi00035162
WBRNAi00035163
WBRNAi00071630
WBRNAi00070874
WBRNAi00070875

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05A10.5c 10789682 10789799 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011462 vap-2 T05A10.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05A10.5c 10789682 10789799 -1
CDS:T05A10.5c 10789853 10789938 -1
CDS:T05A10.5c 10789985 10790095 -1
CDS:T05A10.5c 10790169 10790397 -1
CDS:T05A10.5c 10790443 10790658 -1
CDS:T05A10.5c 10790854 10790945 -1
CDS:T05A10.5c 10790994 10791138 -1
CDS:T05A10.5c 10791184 10791290 -1
CDS:T05A10.5c 10791597 10791626 -1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05A10.5c.1 T05A10.5c.1 1134   X: 10789682-10791626