WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21E8.1b Sequence Name  T21E8.1b
Length (nt)  3615   Chromosome Location  X: 10871346-10871708
Chromosome . Primary Identifier  X Chromosome Location . Start  10871346
Chromosome Location . End  10871708
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E8.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40819 PGP-6, isoform b 134.2 1204 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00053748
WBRNAi00053749
WBRNAi00018982
WBRNAi00018983

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21E8.1b 10871346 10871708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004000 pgp-6 T21E8.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21E8.1b 10871346 10871708 -1
CDS:T21E8.1b 10871754 10871957 -1
CDS:T21E8.1b 10872008 10872472 -1
CDS:T21E8.1b 10872523 10872651 -1
CDS:T21E8.1b 10872696 10872800 -1
CDS:T21E8.1b 10872865 10873227 -1
CDS:T21E8.1b 10873274 10873557 -1
CDS:T21E8.1b 10873608 10873704 -1
CDS:T21E8.1b 10873945 10874034 -1
CDS:T21E8.1b 10874079 10874693 -1
CDS:T21E8.1b 10874743 10874856 -1
CDS:T21E8.1b 10874900 10875071 -1
CDS:T21E8.1b 10875270 10875566 -1
CDS:T21E8.1b 10875614 10875747 -1
CDS:T21E8.1b 10875793 10875902 -1
CDS:T21E8.1b 10875953 10876025 -1

1 Sequence

Length
3615

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21E8.1b.1 T21E8.1b.1 3615   X: 10871346-10876025