WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2a.3 Sequence Name  F58A3.2a.3
Length (nt)  3659   Chromosome Location  X: 11016410-11023386
Chromosome . Primary Identifier  X Chromosome Location . Start  11016410
Chromosome Location . End  11023386 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2a F58A3.2a 3123   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.3 11016410 11023386 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251473   119   X: 11016410-11016528 Caenorhabditis elegans
Exon251481   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251494   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251507   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251520   351   X: 11017580-11017930 Caenorhabditis elegans
Exon251533   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251546   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251559   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251572   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251585   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251598   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251611   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251624   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251637   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251650   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251663   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251676   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251694   221   X: 11021723-11021943 Caenorhabditis elegans
Exon251712   82   X: 11022380-11022461 Caenorhabditis elegans
Exon251720   93   X: 11022953-11023045 Caenorhabditis elegans
Exon251730   280   X: 11023107-11023386 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58A3.2a.3 11016410 11023386 1

1 Sequence

Length
3659

1 Sequence Ontology Term

Identifier Name Description
transcript