WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2b.1 Sequence Name  F58A3.2b.1
Length (nt)  2967   Chromosome Location  X: 11016441-11021893
Chromosome . Primary Identifier  X Chromosome Location . Start  11016441
Chromosome Location . End  11021893 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2b F58A3.2b 2967   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2b.1 11016441 11021893 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251476   88   X: 11016441-11016528 Caenorhabditis elegans
Exon251485   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251498   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251511   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251527   195   X: 11017945-11018139 Caenorhabditis elegans
Exon251537   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251550   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251563   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251576   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251589   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251602   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251615   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251628   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251641   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251654   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251667   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251680   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251693   171   X: 11021723-11021893 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2b.1 11016441 11021893 1

1 Sequence

Length
2967

1 Sequence Ontology Term

Identifier Name Description
transcript