WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58A3.2n.1 Sequence Name  F58A3.2n.1
Length (nt)  2985   Chromosome Location  X: 11016441-11022401
Chromosome . Primary Identifier  X Chromosome Location . Start  11016441
Chromosome Location . End  11022401 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.2n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.2n F58A3.2n 2985   X: 11016441-11016528

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2n.1 11016441 11022401 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251478   88   X: 11016441-11016528 Caenorhabditis elegans
Exon251490   62   X: 11016582-11016643 Caenorhabditis elegans
Exon251503   162   X: 11016691-11016852 Caenorhabditis elegans
Exon251516   70   X: 11017436-11017505 Caenorhabditis elegans
Exon251529   195   X: 11017945-11018139 Caenorhabditis elegans
Exon251542   236   X: 11018215-11018450 Caenorhabditis elegans
Exon251555   240   X: 11018525-11018764 Caenorhabditis elegans
Exon251568   162   X: 11018813-11018974 Caenorhabditis elegans
Exon251581   108   X: 11019021-11019128 Caenorhabditis elegans
Exon251594   437   X: 11019178-11019614 Caenorhabditis elegans
Exon251607   79   X: 11019683-11019761 Caenorhabditis elegans
Exon251620   294   X: 11019817-11020110 Caenorhabditis elegans
Exon251633   197   X: 11020287-11020483 Caenorhabditis elegans
Exon251646   84   X: 11020534-11020617 Caenorhabditis elegans
Exon251659   105   X: 11021150-11021254 Caenorhabditis elegans
Exon251672   163   X: 11021309-11021471 Caenorhabditis elegans
Exon251685   114   X: 11021517-11021630 Caenorhabditis elegans
Exon251691   127   X: 11021723-11021849 Caenorhabditis elegans
Exon251701   40   X: 11021904-11021943 Caenorhabditis elegans
Exon251710   22   X: 11022380-11022401 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F58A3.2n.1 11016441 11022401 1

1 Sequence

Length
2985

1 Sequence Ontology Term

Identifier Name Description
transcript