WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04G3.1a Sequence Name  W04G3.1a
Length (nt)  1008   Chromosome Location  X: 11059994-11060203
Chromosome . Primary Identifier  X Chromosome Location . Start  11059994
Chromosome Location . End  11060203
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03785 LPR-6, isoform a 37.6 335 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00054780
WBRNAi00019599

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W04G3.1a 11059994 11060203 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012255 lpr-6 W04G3.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:W04G3.1a 11059994 11060203 1
CDS:W04G3.1a 11060389 11060563 1
CDS:W04G3.1a 11060650 11060811 1
CDS:W04G3.1a 11060854 11060990 1
CDS:W04G3.1a 11061258 11061391 1
CDS:W04G3.1a 11061441 11061630 1

1 Sequence

Length
1008

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04G3.1a.1 W04G3.1a.1 1249   X: 11059994-11061871