WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04G3.1b.1 Sequence Name  W04G3.1b.1
Length (nt)  1027   Chromosome Location  X: 11060389-11061859
Chromosome . Primary Identifier  X Chromosome Location . Start  11060389
Chromosome Location . End  11061859 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G3.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012255 lpr-6 W04G3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04G3.1b W04G3.1b 798   X: 11060389-11060563

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.1b.1 11060389 11061859 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251824   175   X: 11060389-11060563 Caenorhabditis elegans
Exon251826   162   X: 11060650-11060811 Caenorhabditis elegans
Exon251828   137   X: 11060854-11060990 Caenorhabditis elegans
Exon251830   134   X: 11061258-11061391 Caenorhabditis elegans
Exon251831   419   X: 11061441-11061859 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W04G3.1b.1 11060389 11061859 1

1 Sequence

Length
1027

1 Sequence Ontology Term

Identifier Name Description
transcript