WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W04G3.4 Sequence Name  W04G3.4
Length (nt)  1767   Chromosome Location  X: 11068766-11068805
Chromosome . Primary Identifier  X Chromosome Location . Start  11068766
Chromosome Location . End  11068805
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04G3.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31628 APT-9 66.7 588 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054783
WBRNAi00019601
WBRNAi00083342

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:W04G3.4 11068766 11068805 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier 		Start End Strand
CDS:W04G3.4 11068766 11068805 1
CDS:W04G3.4 11068856 11068935 1
CDS:W04G3.4 11069306 11069389 1
CDS:W04G3.4 11069486 11069762 1
CDS:W04G3.4 11069818 11069945 1
CDS:W04G3.4 11070110 11070262 1
CDS:W04G3.4 11070310 11070493 1
CDS:W04G3.4 11070698 11070786 1
CDS:W04G3.4 11070835 11070888 1
CDS:W04G3.4 11070938 11071056 1
CDS:W04G3.4 11071100 11071263 1
CDS:W04G3.4 11071309 11071478 1
CDS:W04G3.4 11071553 11071777 1

1 Sequence

Length
1767

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W04G3.4.1 W04G3.4.1 2276   X: 11068527-11072047