WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08B4.3.1 Sequence Name  R08B4.3.1
Length (nt)  776   Chromosome Location  X: 11118959-11121005
Chromosome . Primary Identifier  X Chromosome Location . Start  11118959
Chromosome Location . End  11121005 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011139 R08B4.3 R08B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08B4.3 R08B4.3 465   X: 11119185-11119219

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08B4.3.1 11118959 11121005 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251978   261   X: 11118959-11119219 Caenorhabditis elegans
Exon251979   86   X: 11119638-11119723 Caenorhabditis elegans
Exon251980   80   X: 11119802-11119881 Caenorhabditis elegans
Exon251981   56   X: 11120563-11120618 Caenorhabditis elegans
Exon251982   171   X: 11120662-11120832 Caenorhabditis elegans
Exon251983   122   X: 11120884-11121005 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08B4.3.1 11118959 11121005 -1

1 Sequence

Length
776

1 Sequence Ontology Term

Identifier Name Description
transcript