WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D2.1b.1 Sequence Name  F13D2.1b.1
Length (nt)  5151   Chromosome Location  X: 11163959-11189615
Chromosome . Primary Identifier  X Chromosome Location . Start  11163959
Chromosome Location . End  11189615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D2.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008735 F13D2.1 F13D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D2.1b F13D2.1b 4980   X: 11164079-11164172

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F13D2.1b.1 11163959 11189615 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

37 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252053   214   X: 11163959-11164172 Caenorhabditis elegans
Exon252055   121   X: 11164216-11164336 Caenorhabditis elegans
Exon252057   225   X: 11164383-11164607 Caenorhabditis elegans
Exon252059   147   X: 11164914-11165060 Caenorhabditis elegans
Exon252061   181   X: 11165109-11165289 Caenorhabditis elegans
Exon252063   88   X: 11165536-11165623 Caenorhabditis elegans
Exon252065   191   X: 11165668-11165858 Caenorhabditis elegans
Exon252067   69   X: 11165914-11165982 Caenorhabditis elegans
Exon252069   219   X: 11166029-11166247 Caenorhabditis elegans
Exon252071   95   X: 11166798-11166892 Caenorhabditis elegans
Exon252073   148   X: 11167088-11167235 Caenorhabditis elegans
Exon252075   238   X: 11167287-11167524 Caenorhabditis elegans
Exon252077   103   X: 11167570-11167672 Caenorhabditis elegans
Exon252079   177   X: 11167722-11167898 Caenorhabditis elegans
Exon252081   111   X: 11167944-11168054 Caenorhabditis elegans
Exon252083   118   X: 11168331-11168448 Caenorhabditis elegans
Exon252085   58   X: 11168500-11168557 Caenorhabditis elegans
Exon252087   272   X: 11168605-11168876 Caenorhabditis elegans
Exon252089   148   X: 11168927-11169074 Caenorhabditis elegans
Exon252091   90   X: 11169126-11169215 Caenorhabditis elegans
Exon252092   142   X: 11169356-11169497 Caenorhabditis elegans
Exon252095   126   X: 11169585-11169710 Caenorhabditis elegans
Exon252097   112   X: 11169785-11169896 Caenorhabditis elegans
Exon252099   165   X: 11170280-11170444 Caenorhabditis elegans
Exon252101   168   X: 11170673-11170840 Caenorhabditis elegans
Exon252103   177   X: 11174041-11174217 Caenorhabditis elegans
Exon252105   174   X: 11174274-11174447 Caenorhabditis elegans
Exon252107   138   X: 11175076-11175213 Caenorhabditis elegans
Exon252109   72   X: 11175944-11176015 Caenorhabditis elegans
Exon252127   106   X: 11187646-11187751 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F13D2.1b.1 11163959 11189615 -1

1 Sequence

Length
5151

1 Sequence Ontology Term

Identifier Name Description
transcript