WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3a.1 Sequence Name  F46C3.3a.1
Length (nt)  8076   Chromosome Location  X: 11420465-11433588
Chromosome . Primary Identifier  X Chromosome Location . Start  11420465
Chromosome Location . End  11433588 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3a F46C3.3a 7734   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3a.1 11420465 11433588 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

42 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252905   359   X: 11420465-11420823 Caenorhabditis elegans
Exon252916   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252927   167   X: 11421273-11421439 Caenorhabditis elegans
Exon252938   143   X: 11421490-11421632 Caenorhabditis elegans
Exon252949   140   X: 11422050-11422189 Caenorhabditis elegans
Exon252960   161   X: 11422239-11422399 Caenorhabditis elegans
Exon252971   175   X: 11422446-11422620 Caenorhabditis elegans
Exon252982   95   X: 11422702-11422796 Caenorhabditis elegans
Exon252993   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253004   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253015   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253026   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253037   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253048   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253059   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253070   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253081   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253092   111   X: 11425494-11425604 Caenorhabditis elegans
Exon253096   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253107   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253118   83   X: 11426237-11426319 Caenorhabditis elegans
Exon253128   49   X: 11426977-11427025 Caenorhabditis elegans
Exon253137   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253148   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253160   476   X: 11427743-11428218 Caenorhabditis elegans
Exon253170   227   X: 11428401-11428627 Caenorhabditis elegans
Exon253175   154   X: 11428738-11428891 Caenorhabditis elegans
Exon253179   125   X: 11428940-11429064 Caenorhabditis elegans
Exon253183   195   X: 11429112-11429306 Caenorhabditis elegans
Exon253187   135   X: 11429361-11429495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3a.1 11420465 11433588 -1

1 Sequence

Length
8076

1 Sequence Ontology Term

Identifier Name Description
transcript