WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46C3.3e.1 Sequence Name  F46C3.3e.1
Length (nt)  3861   Chromosome Location  X: 11420743-11428150
Chromosome . Primary Identifier  X Chromosome Location . Start  11420743
Chromosome Location . End  11428150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46C3.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002037 hum-4 F46C3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46C3.3e F46C3.3e 3861   X: 11420743-11420823

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3e.1 11420743 11428150 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252911   81   X: 11420743-11420823 Caenorhabditis elegans
Exon252923   102   X: 11421101-11421202 Caenorhabditis elegans
Exon252934   167   X: 11421273-11421439 Caenorhabditis elegans
Exon252945   143   X: 11421490-11421632 Caenorhabditis elegans
Exon252956   140   X: 11422050-11422189 Caenorhabditis elegans
Exon252967   161   X: 11422239-11422399 Caenorhabditis elegans
Exon252978   175   X: 11422446-11422620 Caenorhabditis elegans
Exon252989   95   X: 11422702-11422796 Caenorhabditis elegans
Exon253000   134   X: 11422862-11422995 Caenorhabditis elegans
Exon253011   280   X: 11423153-11423432 Caenorhabditis elegans
Exon253022   109   X: 11423485-11423593 Caenorhabditis elegans
Exon253033   150   X: 11423644-11423793 Caenorhabditis elegans
Exon253044   253   X: 11423847-11424099 Caenorhabditis elegans
Exon253055   125   X: 11424154-11424278 Caenorhabditis elegans
Exon253066   119   X: 11424878-11424996 Caenorhabditis elegans
Exon253077   237   X: 11425042-11425278 Caenorhabditis elegans
Exon253088   121   X: 11425328-11425448 Caenorhabditis elegans
Exon253095   111   X: 11425494-11425604 Caenorhabditis elegans
Exon253103   174   X: 11425682-11425855 Caenorhabditis elegans
Exon253113   127   X: 11425904-11426030 Caenorhabditis elegans
Exon253123   83   X: 11426237-11426319 Caenorhabditis elegans
Exon253133   49   X: 11426977-11427025 Caenorhabditis elegans
Exon253143   122   X: 11427097-11427218 Caenorhabditis elegans
Exon253154   195   X: 11427499-11427693 Caenorhabditis elegans
Exon253158   408   X: 11427743-11428150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46C3.3e.1 11420743 11428150 -1

1 Sequence

Length
3861

1 Sequence Ontology Term

Identifier Name Description
transcript