WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25C12.1a.1 Sequence Name  T25C12.1a.1
Length (nt)  3346   Chromosome Location  X: 11465560-11485871
Chromosome . Primary Identifier  X Chromosome Location . Start  11465560
Chromosome Location . End  11485871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25C12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003003 lin-14 T25C12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25C12.1a T25C12.1a 1620   X: 11468500-11468561

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25C12.1a.1 11465560 11485871 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253278   108   X: 11465560-11465667 Caenorhabditis elegans
Exon253280   76   X: 11468486-11468561 Caenorhabditis elegans
Exon253281   132   X: 11469475-11469606 Caenorhabditis elegans
Exon253285   218   X: 11480781-11480998 Caenorhabditis elegans
Exon253287   204   X: 11481436-11481639 Caenorhabditis elegans
Exon253289   80   X: 11482544-11482623 Caenorhabditis elegans
Exon253291   177   X: 11483106-11483282 Caenorhabditis elegans
Exon253293   109   X: 11483333-11483441 Caenorhabditis elegans
Exon253295   216   X: 11483488-11483703 Caenorhabditis elegans
Exon253297   166   X: 11483751-11483916 Caenorhabditis elegans
Exon253299   148   X: 11483968-11484115 Caenorhabditis elegans
Exon253302   1712   X: 11484160-11485871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25C12.1a.1 11465560 11485871 1

1 Sequence

Length
3346

1 Sequence Ontology Term

Identifier Name Description
transcript