WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H05G16.1b Sequence Name  H05G16.1b
Length (nt)  3207   Chromosome Location  X: 11572565-11572593
Chromosome . Primary Identifier  X Chromosome Location . Start  11572565
Chromosome Location . End  11572593
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05G16.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52019 FRM-3, isoform b 122.8 1068 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00047966
WBRNAi00049303
WBRNAi00114828
WBRNAi00015399
WBRNAi00016198
WBRNAi00033665
WBRNAi00032609

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H05G16.1b 11572565 11572593 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:H05G16.1b 11572565 11572593 1
CDS:H05G16.1b 11576249 11576381 1
CDS:H05G16.1b 11576442 11576546 1
CDS:H05G16.1b 11576609 11576733 1
CDS:H05G16.1b 11577645 11577741 1
CDS:H05G16.1b 11577792 11577916 1
CDS:H05G16.1b 11577960 11578203 1
CDS:H05G16.1b 11578254 11578414 1
CDS:H05G16.1b 11578460 11578534 1
CDS:H05G16.1b 11578620 11578822 1
CDS:H05G16.1b 11581794 11581911 1
CDS:H05G16.1b 11581959 11582259 1
CDS:H05G16.1b 11582769 11582864 1
CDS:H05G16.1b 11582912 11583039 1
CDS:H05G16.1b 11583084 11583242 1
CDS:H05G16.1b 11583291 11583738 1
CDS:H05G16.1b 11583784 11583988 1
CDS:H05G16.1b 11584042 11584262 1
CDS:H05G16.1b 11584648 11584802 1
CDS:H05G16.1b 11584882 11584960 1

1 Sequence

Length
3207

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H05G16.1b.1 H05G16.1b.1 3433   X: 11572505-11585126