WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H05G16.1c Sequence Name  H05G16.1c
Length (nt)  1953   Chromosome Location  X: 11581751-11581911
Chromosome . Primary Identifier  X Chromosome Location . Start  11581751
Chromosome Location . End  11581911
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05G16.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40652 FRM-3, isoform c 74.4 650 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047966
WBRNAi00015399
WBRNAi00032609

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:H05G16.1c 11581751 11581911 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:H05G16.1c 11581751 11581911 1
CDS:H05G16.1c 11581959 11582259 1
CDS:H05G16.1c 11582769 11582864 1
CDS:H05G16.1c 11582912 11583039 1
CDS:H05G16.1c 11583084 11583242 1
CDS:H05G16.1c 11583291 11583738 1
CDS:H05G16.1c 11583784 11583988 1
CDS:H05G16.1c 11584042 11584262 1
CDS:H05G16.1c 11584648 11584802 1
CDS:H05G16.1c 11584882 11584960 1

1 Sequence

Length
1953

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H05G16.1c.1 H05G16.1c.1 2573   X: 11581293-11585122