WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C49F5.2 Sequence Name  C49F5.2
Length (nt)  2127   Chromosome Location  X: 11970307-11970534
Chromosome . Primary Identifier  X Chromosome Location . Start  11970307
Chromosome Location . End  11970534
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49F5.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31454 SET-6 82.1 708 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00042808
WBRNAi00012145
WBRNAi00113440
WBRNAi00086719
WBRNAi00091517

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C49F5.2 11970307 11970534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008206 set-6 C49F5.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:C49F5.2 11970307 11970534 -1
CDS:C49F5.2 11970601 11970720 -1
CDS:C49F5.2 11971255 11971806 -1
CDS:C49F5.2 11971859 11971990 -1
CDS:C49F5.2 11972521 11972773 -1
CDS:C49F5.2 11972821 11973128 -1
CDS:C49F5.2 11973274 11973378 -1
CDS:C49F5.2 11973493 11973594 -1
CDS:C49F5.2 11974170 11974265 -1
CDS:C49F5.2 11974364 11974507 -1
CDS:C49F5.2 11974590 11974676 -1

1 Sequence

Length
2127

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C49F5.2.1 C49F5.2.1 2360   X: 11970077-11974679