WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49F5.5.1 Sequence Name  C49F5.5.1
Length (nt)  475   Chromosome Location  X: 11986187-11987355
Chromosome . Primary Identifier  X Chromosome Location . Start  11986187
Chromosome Location . End  11987355 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49F5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008209 C49F5.5 C49F5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49F5.5 C49F5.5 348   X: 11986188-11986295

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49F5.5.1 11986187 11987355 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254686   109   X: 11986187-11986295 Caenorhabditis elegans
Exon254687   127   X: 11986728-11986854 Caenorhabditis elegans
Exon254688   239   X: 11987117-11987355 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49F5.5.1 11986187 11987355 1

1 Sequence

Length
475

1 Sequence Ontology Term

Identifier Name Description
transcript