WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15A7.1.1 Sequence Name  C15A7.1.1
Length (nt)  1357   Chromosome Location  X: 12065208-12067433
Chromosome . Primary Identifier  X Chromosome Location . Start  12065208
Chromosome Location . End  12067433 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15A7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007594 lgc-23 C15A7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15A7.1 C15A7.1 1212   X: 12065304-12065405

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C15A7.1.1 12065208 12067433 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254858   198   X: 12065208-12065405 Caenorhabditis elegans
Exon254859   150   X: 12065449-12065598 Caenorhabditis elegans
Exon254860   320   X: 12066085-12066404 Caenorhabditis elegans
Exon254861   156   X: 12066449-12066604 Caenorhabditis elegans
Exon254862   108   X: 12066735-12066842 Caenorhabditis elegans
Exon254863   137   X: 12066964-12067100 Caenorhabditis elegans
Exon254864   288   X: 12067146-12067433 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C15A7.1.1 12065208 12067433 1

1 Sequence

Length
1357

1 Sequence Ontology Term

Identifier Name Description
transcript