WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01G6.1.1 Sequence Name  E01G6.1.1
Length (nt)  4649   Chromosome Location  X: 12260881-12266559
Chromosome . Primary Identifier  X Chromosome Location . Start  12260881
Chromosome Location . End  12266559 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01G6.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008449 E01G6.1 E01G6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01G6.1 E01G6.1 4404   X: 12260884-12260916

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01G6.1.1 12260881 12266559 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255218   36   X: 12260881-12260916 Caenorhabditis elegans
Exon255219   113   X: 12260963-12261075 Caenorhabditis elegans
Exon255220   128   X: 12261118-12261245 Caenorhabditis elegans
Exon255221   84   X: 12261468-12261551 Caenorhabditis elegans
Exon255222   122   X: 12261609-12261730 Caenorhabditis elegans
Exon255223   271   X: 12261948-12262218 Caenorhabditis elegans
Exon255224   643   X: 12262373-12263015 Caenorhabditis elegans
Exon255225   101   X: 12263166-12263266 Caenorhabditis elegans
Exon255226   234   X: 12263316-12263549 Caenorhabditis elegans
Exon255227   2571   X: 12263597-12266167 Caenorhabditis elegans
Exon255228   346   X: 12266214-12266559 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01G6.1.1 12260881 12266559 1

1 Sequence

Length
4649

1 Sequence Ontology Term

Identifier Name Description
transcript