WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F17A2.1a Sequence Name  F17A2.1a
Length (nt)  1368   Chromosome Location  X: 12315800-12315955
Chromosome . Primary Identifier  X Chromosome Location . Start  12315800
Chromosome Location . End  12315955
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A2.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51271 XTR-2, isoform a 52.2 455 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00044843
WBRNAi00013438

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F17A2.1a 12315800 12315955 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006966 xtr-2 F17A2.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F17A2.1a 12315800 12315955 1
CDS:F17A2.1a 12316215 12316580 1
CDS:F17A2.1a 12316628 12316730 1
CDS:F17A2.1a 12316931 12317673 1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F17A2.1a.1 F17A2.1a.1 2111   X: 12315568-12318184