WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17A2.7.1 Sequence Name  F17A2.7.1
Length (nt)  951   Chromosome Location  X: 12328976-12330526
Chromosome . Primary Identifier  X Chromosome Location . Start  12328976
Chromosome Location . End  12330526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17A2.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005123 srd-45 F17A2.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17A2.7 F17A2.7 951   X: 12328976-12329260

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.7.1 12328976 12330526 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255344   285   X: 12328976-12329260 Caenorhabditis elegans
Exon255345   135   X: 12329307-12329441 Caenorhabditis elegans
Exon255346   197   X: 12329858-12330054 Caenorhabditis elegans
Exon255347   73   X: 12330103-12330175 Caenorhabditis elegans
Exon255348   79   X: 12330218-12330296 Caenorhabditis elegans
Exon255349   182   X: 12330345-12330526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17A2.7.1 12328976 12330526 1

1 Sequence

Length
951

1 Sequence Ontology Term

Identifier Name Description
transcript