WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17E5.2.2 Sequence Name  F17E5.2.2
Length (nt)  2213   Chromosome Location  X: 12394258-12399536
Chromosome . Primary Identifier  X Chromosome Location . Start  12394258
Chromosome Location . End  12399536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17E5.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008924 F17E5.2 F17E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17E5.2 F17E5.2 1596   X: 12394416-12394476

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.2.2 12394258 12399536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255455   111   X: 12394258-12394368 Caenorhabditis elegans
Exon255458   62   X: 12394415-12394476 Caenorhabditis elegans
Exon255460   83   X: 12394574-12394656 Caenorhabditis elegans
Exon255462   77   X: 12394708-12394784 Caenorhabditis elegans
Exon255464   112   X: 12395245-12395356 Caenorhabditis elegans
Exon255466   215   X: 12395922-12396136 Caenorhabditis elegans
Exon255468   112   X: 12396304-12396415 Caenorhabditis elegans
Exon255470   159   X: 12396467-12396625 Caenorhabditis elegans
Exon255472   229   X: 12396677-12396905 Caenorhabditis elegans
Exon255474   146   X: 12397629-12397774 Caenorhabditis elegans
Exon255476   211   X: 12397825-12398035 Caenorhabditis elegans
Exon255478   116   X: 12398088-12398203 Caenorhabditis elegans
Exon255480   580   X: 12398957-12399536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.2.2 12394258 12399536 1

1 Sequence

Length
2213

1 Sequence Ontology Term

Identifier Name Description
transcript