WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17E5.2.1 Sequence Name  F17E5.2.1
Length (nt)  2187   Chromosome Location  X: 12394265-12399534
Chromosome . Primary Identifier  X Chromosome Location . Start  12394265
Chromosome Location . End  12399534 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17E5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008924 F17E5.2 F17E5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17E5.2 F17E5.2 1596   X: 12394416-12394476

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.2.1 12394265 12399534 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255456   87   X: 12394265-12394351 Caenorhabditis elegans
Exon255457   62   X: 12394415-12394476 Caenorhabditis elegans
Exon255459   83   X: 12394574-12394656 Caenorhabditis elegans
Exon255461   77   X: 12394708-12394784 Caenorhabditis elegans
Exon255463   112   X: 12395245-12395356 Caenorhabditis elegans
Exon255465   215   X: 12395922-12396136 Caenorhabditis elegans
Exon255467   112   X: 12396304-12396415 Caenorhabditis elegans
Exon255469   159   X: 12396467-12396625 Caenorhabditis elegans
Exon255471   229   X: 12396677-12396905 Caenorhabditis elegans
Exon255473   146   X: 12397629-12397774 Caenorhabditis elegans
Exon255475   211   X: 12397825-12398035 Caenorhabditis elegans
Exon255477   116   X: 12398088-12398203 Caenorhabditis elegans
Exon255479   578   X: 12398957-12399534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17E5.2.1 12394265 12399534 1

1 Sequence

Length
2187

1 Sequence Ontology Term

Identifier Name Description
transcript