WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T18D3.2.1 Sequence Name  T18D3.2.1
Length (nt)  1482   Chromosome Location  X: 12458979-12461657
Chromosome . Primary Identifier  X Chromosome Location . Start  12458979
Chromosome Location . End  12461657 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T18D3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003854 odr-7 T18D3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T18D3.2 T18D3.2 1374   X: 12459069-12459232

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T18D3.2.1 12458979 12461657 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255570   254   X: 12458979-12459232 Caenorhabditis elegans
Exon255571   143   X: 12459280-12459422 Caenorhabditis elegans
Exon255572   167   X: 12459929-12460095 Caenorhabditis elegans
Exon255573   88   X: 12460141-12460228 Caenorhabditis elegans
Exon255574   478   X: 12460278-12460755 Caenorhabditis elegans
Exon255575   352   X: 12461306-12461657 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T18D3.2.1 12458979 12461657 -1

1 Sequence

Length
1482

1 Sequence Ontology Term

Identifier Name Description
transcript