WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07C5.1b.1 Sequence Name  T07C5.1b.1
Length (nt)  1882   Chromosome Location  X: 12691573-12695652
Chromosome . Primary Identifier  X Chromosome Location . Start  12691573
Chromosome Location . End  12695652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07C5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011564 ugt-50 T07C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07C5.1b T07C5.1b 573   X: 12691737-12691907

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07C5.1b.1 12691573 12695652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256063   335   X: 12691573-12691907 Caenorhabditis elegans
Exon256067   199   X: 12692182-12692380 Caenorhabditis elegans
Exon256072   100   X: 12692508-12692607 Caenorhabditis elegans
Exon256082   270   X: 12692666-12692935 Caenorhabditis elegans
Exon256087   177   X: 12693852-12694028 Caenorhabditis elegans
Exon256090   160   X: 12694070-12694229 Caenorhabditis elegans
Exon256093   81   X: 12694285-12694365 Caenorhabditis elegans
Exon256096   149   X: 12694411-12694559 Caenorhabditis elegans
Exon256099   71   X: 12694617-12694687 Caenorhabditis elegans
Exon256104   340   X: 12695313-12695652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07C5.1b.1 12691573 12695652 1

1 Sequence

Length
1882

1 Sequence Ontology Term

Identifier Name Description
transcript