WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F11C1.5a Sequence Name  F11C1.5a
Length (nt)  5415   Chromosome Location  X: 12991499-12991559
Chromosome . Primary Identifier  X Chromosome Location . Start  12991499
Chromosome Location . End  12991559
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C1.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41311 VWA-8, isoform a 204.1 1804 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002027
WBRNAi00044364
WBRNAi00013117

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F11C1.5a 12991499 12991559 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008694 vwa-8 F11C1.5 Caenorhabditis elegans

28 Locations


Feature . Primary Identifier
Start End Strand
CDS:F11C1.5a 12991499 12991559 1
CDS:F11C1.5a 12991607 12991836 1
CDS:F11C1.5a 12992168 12992278 1
CDS:F11C1.5a 12992326 12992811 1
CDS:F11C1.5a 12992891 12993007 1
CDS:F11C1.5a 12993055 12993623 1
CDS:F11C1.5a 12994048 12994285 1
CDS:F11C1.5a 12994341 12994783 1
CDS:F11C1.5a 12994828 12994927 1
CDS:F11C1.5a 12995080 12995296 1
CDS:F11C1.5a 12995344 12995573 1
CDS:F11C1.5a 12995627 12995744 1
CDS:F11C1.5a 12995856 12996208 1
CDS:F11C1.5a 12996555 12996665 1
CDS:F11C1.5a 12996709 12996796 1
CDS:F11C1.5a 12996841 12996910 1
CDS:F11C1.5a 12996955 12997081 1
CDS:F11C1.5a 12997131 12997289 1
CDS:F11C1.5a 12997340 12997520 1
CDS:F11C1.5a 12997741 12997846 1
CDS:F11C1.5a 12997891 12998136 1
CDS:F11C1.5a 12998184 12998403 1
CDS:F11C1.5a 12998448 12998549 1
CDS:F11C1.5a 12998595 12998695 1
CDS:F11C1.5a 12998746 12998929 1
CDS:F11C1.5a 12999013 12999132 1
CDS:F11C1.5a 12999184 12999305 1
CDS:F11C1.5a 12999367 12999571 1

1 Sequence

Length
5415

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11C1.5a.1 F11C1.5a.1 5499   X: 12991476-12999632
Transcript:F11C1.5a.2 F11C1.5a.2 5496   X: 12991489-12999642