WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17H10.3b.1 Sequence Name  F17H10.3b.1
Length (nt)  1431   Chromosome Location  X: 13116532-13119149
Chromosome . Primary Identifier  X Chromosome Location . Start  13116532
Chromosome Location . End  13119149 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17H10.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008927 snx-17 F17H10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17H10.3b F17H10.3b 1431   X: 13116532-13116588

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F17H10.3b.1 13116532 13119149 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon256928   57   X: 13116532-13116588 Caenorhabditis elegans
Exon256930   111   X: 13116648-13116758 Caenorhabditis elegans
Exon256932   138   X: 13116941-13117078 Caenorhabditis elegans
Exon256934   141   X: 13117125-13117265 Caenorhabditis elegans
Exon256936   141   X: 13117313-13117453 Caenorhabditis elegans
Exon256938   172   X: 13117640-13117811 Caenorhabditis elegans
Exon256941   100   X: 13117860-13117959 Caenorhabditis elegans
Exon256943   130   X: 13118013-13118142 Caenorhabditis elegans
Exon256945   111   X: 13118472-13118582 Caenorhabditis elegans
Exon256947   65   X: 13118636-13118700 Caenorhabditis elegans
Exon256949   196   X: 13118746-13118941 Caenorhabditis elegans
Exon256950   69   X: 13119081-13119149 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F17H10.3b.1 13116532 13119149 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
transcript