WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46G10.7a.2 Sequence Name  F46G10.7a.2
Length (nt)  1323   Chromosome Location  X: 13328067-13331263
Chromosome . Primary Identifier  X Chromosome Location . Start  13328067
Chromosome Location . End  13331263 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46G10.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004801 sir-2.2 F46G10.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46G10.7a F46G10.7a 864   X: 13329264-13329390

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F46G10.7a.2 13328067 13331263 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257348   296   X: 13328067-13328362 Caenorhabditis elegans
Exon257352   129   X: 13329262-13329390 Caenorhabditis elegans
Exon257360   103   X: 13329440-13329542 Caenorhabditis elegans
Exon257362   141   X: 13329760-13329900 Caenorhabditis elegans
Exon257367   81   X: 13329944-13330024 Caenorhabditis elegans
Exon257372   115   X: 13330484-13330598 Caenorhabditis elegans
Exon257377   183   X: 13330645-13330827 Caenorhabditis elegans
Exon257385   275   X: 13330989-13331263 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F46G10.7a.2 13328067 13331263 1

1 Sequence

Length
1323

1 Sequence Ontology Term

Identifier Name Description
transcript