WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C29F7.2a.1 Sequence Name  C29F7.2a.1
Length (nt)  1310   Chromosome Location  X: 13416078-13418220
Chromosome . Primary Identifier  X Chromosome Location . Start  13416078
Chromosome Location . End  13418220 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007811 C29F7.2 C29F7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C29F7.2a C29F7.2a 1185   X: 13416084-13416179

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C29F7.2a.1 13416078 13418220 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257563   102   X: 13416078-13416179 Caenorhabditis elegans
Exon257564   120   X: 13416226-13416345 Caenorhabditis elegans
Exon257565   133   X: 13416664-13416796 Caenorhabditis elegans
Exon257567   143   X: 13416841-13416983 Caenorhabditis elegans
Exon257569   87   X: 13417033-13417119 Caenorhabditis elegans
Exon257571   160   X: 13417166-13417325 Caenorhabditis elegans
Exon257573   266   X: 13417558-13417823 Caenorhabditis elegans
Exon257575   84   X: 13417878-13417961 Caenorhabditis elegans
Exon257578   215   X: 13418006-13418220 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C29F7.2a.1 13416078 13418220 1

1 Sequence

Length
1310

1 Sequence Ontology Term

Identifier Name Description
transcript