WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02D10.5.1 Sequence Name  F02D10.5.1
Length (nt)  1965   Chromosome Location  X: 13452667-13456542
Chromosome . Primary Identifier  X Chromosome Location . Start  13452667
Chromosome Location . End  13456542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02D10.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001465 flr-1 F02D10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02D10.5 F02D10.5 1917   X: 13452706-13452805

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F02D10.5.1 13452667 13456542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257626   139   X: 13452667-13452805 Caenorhabditis elegans
Exon257627   159   X: 13452853-13453011 Caenorhabditis elegans
Exon257628   86   X: 13453105-13453190 Caenorhabditis elegans
Exon257629   84   X: 13453354-13453437 Caenorhabditis elegans
Exon257630   165   X: 13453486-13453650 Caenorhabditis elegans
Exon257631   136   X: 13453697-13453832 Caenorhabditis elegans
Exon257632   127   X: 13453917-13454043 Caenorhabditis elegans
Exon257633   154   X: 13454090-13454243 Caenorhabditis elegans
Exon257634   72   X: 13454405-13454476 Caenorhabditis elegans
Exon257635   140   X: 13454524-13454663 Caenorhabditis elegans
Exon257636   95   X: 13454707-13454801 Caenorhabditis elegans
Exon257639   108   X: 13454846-13454953 Caenorhabditis elegans
Exon257640   119   X: 13455002-13455120 Caenorhabditis elegans
Exon257641   119   X: 13455165-13455283 Caenorhabditis elegans
Exon257642   73   X: 13455369-13455441 Caenorhabditis elegans
Exon257643   120   X: 13455647-13455766 Caenorhabditis elegans
Exon257644   69   X: 13456474-13456542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F02D10.5.1 13452667 13456542 -1

1 Sequence

Length
1965

1 Sequence Ontology Term

Identifier Name Description
transcript