WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F15A2.6b Sequence Name  F15A2.6b
Length (nt)  2508   Chromosome Location  X: 13489453-13489466
Chromosome . Primary Identifier  X Chromosome Location . Start  13489453
Chromosome Location . End  13489466
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15A2.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40646 SAD-1, isoform b 92.3 835 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00044671
WBRNAi00013337
WBRNAi00013338
WBRNAi00030980
WBRNAi00060123
WBRNAi00060125
WBRNAi00060122
WBRNAi00060124
WBRNAi00060126
WBRNAi00060127
WBRNAi00060128
WBRNAi00060129
WBRNAi00060130
WBRNAi00115611
WBRNAi00098423
WBRNAi00115610
WBRNAi00115716
WBRNAi00115707

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F15A2.6b 13489453 13489466 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004719 sad-1 F15A2.6 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:F15A2.6b 13489453 13489466 -1
CDS:F15A2.6b 13489622 13489703 -1
CDS:F15A2.6b 13490196 13490322 -1
CDS:F15A2.6b 13490369 13490520 -1
CDS:F15A2.6b 13490584 13490824 -1
CDS:F15A2.6b 13491025 13491287 -1
CDS:F15A2.6b 13491334 13491538 -1
CDS:F15A2.6b 13491657 13492016 -1
CDS:F15A2.6b 13492119 13492534 -1
CDS:F15A2.6b 13492579 13492729 -1
CDS:F15A2.6b 13492784 13492924 -1
CDS:F15A2.6b 13493574 13493659 -1
CDS:F15A2.6b 13494385 13494479 -1
CDS:F15A2.6b 13494739 13494895 -1
CDS:F15A2.6b 13500535 13500552 -1

1 Sequence

Length
2508

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F15A2.6b.1 F15A2.6b.1 3430   X: 13487552-13500668