WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R01E6.4b.1 Sequence Name  R01E6.4b.1
Length (nt)  1449   Chromosome Location  X: 13533655-13536312
Chromosome . Primary Identifier  X Chromosome Location . Start  13533655
Chromosome Location . End  13536312 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R01E6.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R01E6.4b R01E6.4b 1449   X: 13533655-13533657

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.4b.1 13533655 13536312 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257793   3   X: 13533655-13533657 Caenorhabditis elegans
Exon257795   110   X: 13533715-13533824 Caenorhabditis elegans
Exon257797   103   X: 13533871-13533973 Caenorhabditis elegans
Exon257799   103   X: 13534026-13534128 Caenorhabditis elegans
Exon257801   190   X: 13534186-13534375 Caenorhabditis elegans
Exon257803   142   X: 13534430-13534571 Caenorhabditis elegans
Exon257805   191   X: 13534625-13534815 Caenorhabditis elegans
Exon257807   103   X: 13535217-13535319 Caenorhabditis elegans
Exon257809   138   X: 13535372-13535509 Caenorhabditis elegans
Exon257811   168   X: 13535557-13535724 Caenorhabditis elegans
Exon257812   198   X: 13536115-13536312 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R01E6.4b.1 13533655 13536312 1

1 Sequence

Length
1449

1 Sequence Ontology Term

Identifier Name Description
transcript