WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B11.3a.1 Sequence Name  F54B11.3a.1
Length (nt)  3666   Chromosome Location  X: 13584775-13589821
Chromosome . Primary Identifier  X Chromosome Location . Start  13584775
Chromosome Location . End  13589821 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006816 unc-84 F54B11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B11.3a F54B11.3a 3336   X: 13584780-13584976

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.3a.1 13584775 13589821 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257897   202   X: 13584775-13584976 Caenorhabditis elegans
Exon257899   281   X: 13585471-13585751 Caenorhabditis elegans
Exon257901   829   X: 13585804-13586632 Caenorhabditis elegans
Exon257903   443   X: 13586692-13587134 Caenorhabditis elegans
Exon257905   264   X: 13587193-13587456 Caenorhabditis elegans
Exon257907   156   X: 13587937-13588092 Caenorhabditis elegans
Exon257909   458   X: 13588144-13588601 Caenorhabditis elegans
Exon257911   321   X: 13588677-13588997 Caenorhabditis elegans
Exon257912   273   X: 13589050-13589322 Caenorhabditis elegans
Exon257913   439   X: 13589383-13589821 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.3a.1 13584775 13589821 1

1 Sequence

Length
3666

1 Sequence Ontology Term

Identifier Name Description
transcript