WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54B11.1.1 Sequence Name  F54B11.1.1
Length (nt)  1020   Chromosome Location  X: 13590035-13591207
Chromosome . Primary Identifier  X Chromosome Location . Start  13590035
Chromosome Location . End  13591207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54B11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000598 col-9 F54B11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54B11.1 F54B11.1 1020   X: 13590035-13590202

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.1.1 13590035 13591207 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon257914   168   X: 13590035-13590202 Caenorhabditis elegans
Exon257915   852   X: 13590356-13591207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54B11.1.1 13590035 13591207 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
transcript